Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scube1Q6NZL8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Scube1Q6NZL8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scube1Q6NZL8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scube1Q6NZL8 Gm14117-201ENSMUST00000122417 843 ntBASIC18.58■□□□□ 0.56
Scube1Q6NZL8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube1Q6NZL8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.58■□□□□ 0.56
Scube1Q6NZL8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube1Q6NZL8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube1Q6NZL8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scube1Q6NZL8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scube1Q6NZL8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Etf1-202ENSMUST00000180351 108 ntBASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scube1Q6NZL8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scube1Q6NZL8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scube1Q6NZL8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.54■□□□□ 0.56
Scube1Q6NZL8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scube1Q6NZL8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scube1Q6NZL8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scube1Q6NZL8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scube1Q6NZL8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scube1Q6NZL8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scube1Q6NZL8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.52■□□□□ 0.56
Scube1Q6NZL8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Scube1Q6NZL8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Scube1Q6NZL8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scube1Q6NZL8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 BC021767-201ENSMUST00000126387 1716 ntBASIC18.51■□□□□ 0.55
Scube1Q6NZL8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scube1Q6NZL8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.5■□□□□ 0.55
Scube1Q6NZL8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Scube1Q6NZL8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scube1Q6NZL8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms