Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.23■■□□□ 1.31
Best3Q6H1V1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.23■■□□□ 1.31
Best3Q6H1V1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Best3Q6H1V1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
Best3Q6H1V1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Best3Q6H1V1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Best3Q6H1V1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Best3Q6H1V1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Best3Q6H1V1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Best3Q6H1V1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Best3Q6H1V1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.21■■□□□ 1.31
Best3Q6H1V1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Best3Q6H1V1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.2■■□□□ 1.3
Best3Q6H1V1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Rab3c-203ENSMUST00000224180 967 ntBASIC23.2■■□□□ 1.3
Best3Q6H1V1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Best3Q6H1V1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Best3Q6H1V1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Best3Q6H1V1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.19■■□□□ 1.3
Best3Q6H1V1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.18■■□□□ 1.3
Best3Q6H1V1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Best3Q6H1V1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.18■■□□□ 1.3
Best3Q6H1V1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.18■■□□□ 1.3
Best3Q6H1V1 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.18■■□□□ 1.3
Best3Q6H1V1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.17■■□□□ 1.3
Best3Q6H1V1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.17■■□□□ 1.3
Best3Q6H1V1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.17■■□□□ 1.3
Best3Q6H1V1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Best3Q6H1V1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Best3Q6H1V1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Best3Q6H1V1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 Trmt13-210ENSMUST00000198454 880 ntBASIC23.16■■□□□ 1.3
Best3Q6H1V1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Best3Q6H1V1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
Best3Q6H1V1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Best3Q6H1V1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.15■■□□□ 1.3
Best3Q6H1V1 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.15■■□□□ 1.3
Best3Q6H1V1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.15■■□□□ 1.3
Best3Q6H1V1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Best3Q6H1V1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Best3Q6H1V1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Best3Q6H1V1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Best3Q6H1V1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
Best3Q6H1V1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.14■■□□□ 1.29
Best3Q6H1V1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Best3Q6H1V1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Best3Q6H1V1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Best3Q6H1V1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.13■■□□□ 1.29
Best3Q6H1V1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Best3Q6H1V1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
Best3Q6H1V1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Best3Q6H1V1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Best3Q6H1V1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Best3Q6H1V1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms