Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tbr1Q64336 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tbr1Q64336 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tbr1Q64336 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tbr1Q64336 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tbr1Q64336 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tbr1Q64336 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tbr1Q64336 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tbr1Q64336 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Tbr1Q64336 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.5■□□□□ 0.39
Tbr1Q64336 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tbr1Q64336 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.5■□□□□ 0.39
Tbr1Q64336 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tbr1Q64336 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.5■□□□□ 0.39
Tbr1Q64336 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.5■□□□□ 0.39
Tbr1Q64336 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tbr1Q64336 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Tbr1Q64336 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.49■□□□□ 0.39
Tbr1Q64336 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tbr1Q64336 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tbr1Q64336 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tbr1Q64336 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tbr1Q64336 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tbr1Q64336 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tbr1Q64336 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.48■□□□□ 0.39
Tbr1Q64336 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.48■□□□□ 0.39
Tbr1Q64336 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tbr1Q64336 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Tbr1Q64336 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Tbr1Q64336 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tbr1Q64336 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.48■□□□□ 0.39
Tbr1Q64336 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tbr1Q64336 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.47■□□□□ 0.39
Tbr1Q64336 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tbr1Q64336 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tbr1Q64336 Gm12896-201ENSMUST00000118430 226 ntBASIC17.47■□□□□ 0.39
Tbr1Q64336 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.47■□□□□ 0.39
Tbr1Q64336 Gm6576-201ENSMUST00000169678 883 ntBASIC17.47■□□□□ 0.39
Tbr1Q64336 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tbr1Q64336 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.47■□□□□ 0.39
Tbr1Q64336 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tbr1Q64336 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tbr1Q64336 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tbr1Q64336 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tbr1Q64336 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tbr1Q64336 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tbr1Q64336 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tbr1Q64336 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tbr1Q64336 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Tbr1Q64336 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tbr1Q64336 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tbr1Q64336 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tbr1Q64336 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tbr1Q64336 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Tbr1Q64336 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Tbr1Q64336 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Tbr1Q64336 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tbr1Q64336 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tbr1Q64336 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tbr1Q64336 Gm5643-201ENSMUST00000117081 966 ntBASIC17.44■□□□□ 0.38
Tbr1Q64336 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tbr1Q64336 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Tbr1Q64336 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Tbr1Q64336 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tbr1Q64336 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tbr1Q64336 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tbr1Q64336 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tbr1Q64336 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tbr1Q64336 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms