Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.03□□□□□ -0.16
Ndufa4Q62425 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ndufa4Q62425 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndufa4Q62425 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndufa4Q62425 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ndufa4Q62425 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndufa4Q62425 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndufa4Q62425 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ndufa4Q62425 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndufa4Q62425 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndufa4Q62425 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufa4Q62425 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndufa4Q62425 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.01□□□□□ -0.17
Ndufa4Q62425 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndufa4Q62425 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14□□□□□ -0.17
Ndufa4Q62425 Gm12366-201ENSMUST00000121722 873 ntBASIC14□□□□□ -0.17
Ndufa4Q62425 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14□□□□□ -0.17
Ndufa4Q62425 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14□□□□□ -0.17
Ndufa4Q62425 Gm5786-201ENSMUST00000085368 882 ntBASIC14□□□□□ -0.17
Ndufa4Q62425 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ndufa4Q62425 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ndufa4Q62425 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.99□□□□□ -0.17
Ndufa4Q62425 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ndufa4Q62425 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.99□□□□□ -0.17
Ndufa4Q62425 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ndufa4Q62425 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 BC021767-201ENSMUST00000126387 1716 ntBASIC13.98□□□□□ -0.17
Ndufa4Q62425 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ndufa4Q62425 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ndufa4Q62425 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms