Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ss18Q62280 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ss18Q62280 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ss18Q62280 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Ss18Q62280 Mir6236-201ENSMUST00000184437 123 ntBASIC14.28□□□□□ -0.12
Ss18Q62280 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.28□□□□□ -0.12
Ss18Q62280 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.28□□□□□ -0.12
Ss18Q62280 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ss18Q62280 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ss18Q62280 Gm9870-201ENSMUST00000063874 645 ntBASIC14.28□□□□□ -0.12
Ss18Q62280 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ss18Q62280 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ss18Q62280 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ss18Q62280 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.28□□□□□ -0.12
Ss18Q62280 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ss18Q62280 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ss18Q62280 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ss18Q62280 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ss18Q62280 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ss18Q62280 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ss18Q62280 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ss18Q62280 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ss18Q62280 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ss18Q62280 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ss18Q62280 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ss18Q62280 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ss18Q62280 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ss18Q62280 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ss18Q62280 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.26□□□□□ -0.13
Ss18Q62280 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ss18Q62280 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ss18Q62280 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ss18Q62280 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ss18Q62280 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ss18Q62280 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.24□□□□□ -0.13
Ss18Q62280 Gm43530-201ENSMUST00000195920 274 ntBASIC14.24□□□□□ -0.13
Ss18Q62280 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.24□□□□□ -0.13
Ss18Q62280 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ss18Q62280 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ss18Q62280 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ss18Q62280 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ss18Q62280 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.23□□□□□ -0.13
Ss18Q62280 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ss18Q62280 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ss18Q62280 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ss18Q62280 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms