Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Rai1Q61818 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.92■□□□□ 0.62
Rai1Q61818 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Gm7860-201ENSMUST00000121190 879 ntBASIC18.92■□□□□ 0.62
Rai1Q61818 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rai1Q61818 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rai1Q61818 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rai1Q61818 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rai1Q61818 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rai1Q61818 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.91■□□□□ 0.62
Rai1Q61818 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rai1Q61818 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.9■□□□□ 0.62
Rai1Q61818 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.9■□□□□ 0.62
Rai1Q61818 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.9■□□□□ 0.62
Rai1Q61818 Trmt13-210ENSMUST00000198454 880 ntBASIC18.9■□□□□ 0.62
Rai1Q61818 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rai1Q61818 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rai1Q61818 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.9■□□□□ 0.62
Rai1Q61818 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rai1Q61818 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rai1Q61818 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rai1Q61818 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.89■□□□□ 0.61
Rai1Q61818 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rai1Q61818 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rai1Q61818 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.89■□□□□ 0.61
Rai1Q61818 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.88■□□□□ 0.61
Rai1Q61818 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
Rai1Q61818 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rai1Q61818 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Rai1Q61818 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.87■□□□□ 0.61
Rai1Q61818 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.87■□□□□ 0.61
Rai1Q61818 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.87■□□□□ 0.61
Rai1Q61818 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rai1Q61818 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rai1Q61818 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rai1Q61818 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.86■□□□□ 0.61
Rai1Q61818 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rai1Q61818 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rai1Q61818 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.86■□□□□ 0.61
Rai1Q61818 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rai1Q61818 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rai1Q61818 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rai1Q61818 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rai1Q61818 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.85■□□□□ 0.61
Rai1Q61818 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rai1Q61818 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rai1Q61818 Mir7071-201ENSMUST00000184847 69 ntBASIC18.85■□□□□ 0.61
Rai1Q61818 Gm10812-201ENSMUST00000099864 546 ntBASIC18.85■□□□□ 0.61
Rai1Q61818 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Rai1Q61818 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Rai1Q61818 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rai1Q61818 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rai1Q61818 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rai1Q61818 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rai1Q61818 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms