Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim2Q61079 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sim2Q61079 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim2Q61079 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim2Q61079 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sim2Q61079 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.97■□□□□ 0.63
Sim2Q61079 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.96■□□□□ 0.63
Sim2Q61079 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.96■□□□□ 0.63
Sim2Q61079 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Rab3c-203ENSMUST00000224180 967 ntBASIC18.96■□□□□ 0.63
Sim2Q61079 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sim2Q61079 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sim2Q61079 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sim2Q61079 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.96■□□□□ 0.63
Sim2Q61079 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim2Q61079 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim2Q61079 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sim2Q61079 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim2Q61079 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim2Q61079 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.95■□□□□ 0.62
Sim2Q61079 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sim2Q61079 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.95■□□□□ 0.62
Sim2Q61079 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim2Q61079 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.95■□□□□ 0.62
Sim2Q61079 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sim2Q61079 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Sim2Q61079 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.94■□□□□ 0.62
Sim2Q61079 Gm26524-201ENSMUST00000192339 390 ntBASIC18.94■□□□□ 0.62
Sim2Q61079 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sim2Q61079 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.94■□□□□ 0.62
Sim2Q61079 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sim2Q61079 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sim2Q61079 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.93■□□□□ 0.62
Sim2Q61079 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Sim2Q61079 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Gm6576-201ENSMUST00000169678 883 ntBASIC18.93■□□□□ 0.62
Sim2Q61079 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sim2Q61079 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sim2Q61079 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sim2Q61079 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Sim2Q61079 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sim2Q61079 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Sim2Q61079 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.92■□□□□ 0.62
Sim2Q61079 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.92■□□□□ 0.62
Sim2Q61079 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sim2Q61079 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sim2Q61079 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sim2Q61079 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.92■□□□□ 0.62
Sim2Q61079 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Sim2Q61079 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sim2Q61079 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.91■□□□□ 0.62
Sim2Q61079 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Sim2Q61079 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sim2Q61079 Gm27275-201ENSMUST00000184318 272 ntBASIC18.91■□□□□ 0.62
Sim2Q61079 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sim2Q61079 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sim2Q61079 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sim2Q61079 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sim2Q61079 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Sim2Q61079 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sim2Q61079 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sim2Q61079 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sim2Q61079 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sim2Q61079 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sim2Q61079 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sim2Q61079 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sim2Q61079 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.89■□□□□ 0.61
Sim2Q61079 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sim2Q61079 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.89■□□□□ 0.61
Sim2Q61079 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms