Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.69■□□□□ 0.42
Foxd3Q61060 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd3Q61060 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd3Q61060 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd3Q61060 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd3Q61060 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Foxd3Q61060 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxd3Q61060 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.68■□□□□ 0.42
Foxd3Q61060 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.68■□□□□ 0.42
Foxd3Q61060 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Foxd3Q61060 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Foxd3Q61060 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.68■□□□□ 0.42
Foxd3Q61060 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Foxd3Q61060 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxd3Q61060 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Foxd3Q61060 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.67■□□□□ 0.42
Foxd3Q61060 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.67■□□□□ 0.42
Foxd3Q61060 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.67■□□□□ 0.42
Foxd3Q61060 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxd3Q61060 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.66■□□□□ 0.42
Foxd3Q61060 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Foxd3Q61060 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.66■□□□□ 0.42
Foxd3Q61060 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.66■□□□□ 0.42
Foxd3Q61060 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Foxd3Q61060 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxd3Q61060 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Foxd3Q61060 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Foxd3Q61060 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Foxd3Q61060 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Foxd3Q61060 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.65■□□□□ 0.42
Foxd3Q61060 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxd3Q61060 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Foxd3Q61060 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
Foxd3Q61060 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Foxd3Q61060 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Foxd3Q61060 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Foxd3Q61060 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.64■□□□□ 0.41
Foxd3Q61060 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Foxd3Q61060 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Foxd3Q61060 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
Foxd3Q61060 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.64■□□□□ 0.41
Foxd3Q61060 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Foxd3Q61060 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Foxd3Q61060 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd3Q61060 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.63■□□□□ 0.41
Foxd3Q61060 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd3Q61060 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Foxd3Q61060 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.63■□□□□ 0.41
Foxd3Q61060 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd3Q61060 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Foxd3Q61060 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Foxd3Q61060 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd3Q61060 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd3Q61060 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.62■□□□□ 0.41
Foxd3Q61060 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd3Q61060 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Foxd3Q61060 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms