Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-4Q5R1I0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-4Q5R1I0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Gm26571-201ENSMUST00000181399 666 ntBASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Gm42569-201ENSMUST00000200539 472 ntBASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-4Q5R1I0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-4Q5R1I0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-4Q5R1I0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-4Q5R1I0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-4Q5R1I0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 Reep4-203ENSMUST00000226563 1444 ntBASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-4Q5R1I0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Gm10033-202ENSMUST00000211874 928 ntBASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav6d-4Q5R1I0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-4Q5R1I0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Gm13234-201ENSMUST00000120010 747 ntBASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-4Q5R1I0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms