Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Mir6538-201ENSMUST00000183713 110 ntBASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.02■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav15-1-dv6-1Q5R1D2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms