Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf43Q5NCP0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Gm13534-201ENSMUST00000121169 513 ntBASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf43Q5NCP0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Gm38205-201ENSMUST00000192243 258 ntBASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Gm6365-201ENSMUST00000054711 744 ntBASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf43Q5NCP0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf43Q5NCP0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf43Q5NCP0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Gm5408-201ENSMUST00000197998 747 ntBASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf43Q5NCP0 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Gm20049-201ENSMUST00000219950 730 ntBASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf43Q5NCP0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms