Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil2Q3V3V9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Gm12933-201ENSMUST00000120203 872 ntBASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil2Q3V3V9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil2Q3V3V9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil2Q3V3V9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil2Q3V3V9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil2Q3V3V9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Mir7071-201ENSMUST00000184847 69 ntBASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.64■■□□□ 1.05
Carmil2Q3V3V9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.63■■□□□ 1.05
Carmil2Q3V3V9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Mir6236-201ENSMUST00000184437 123 ntBASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Carmil2Q3V3V9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Gm7977-201ENSMUST00000193787 748 ntBASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Gm40848-201ENSMUST00000221998 324 ntBASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil2Q3V3V9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil2Q3V3V9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Carmil2Q3V3V9 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.6■■□□□ 1.05
Carmil2Q3V3V9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil2Q3V3V9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.6■■□□□ 1.05
Carmil2Q3V3V9 Gm27801-201ENSMUST00000184174 223 ntBASIC21.6■■□□□ 1.05
Carmil2Q3V3V9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil2Q3V3V9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Gm10653-202ENSMUST00000139570 835 ntBASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Carmil2Q3V3V9 Gm22240-201ENSMUST00000175225 82 ntBASIC21.58■■□□□ 1.05
Carmil2Q3V3V9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Carmil2Q3V3V9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.58■■□□□ 1.04
Carmil2Q3V3V9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Carmil2Q3V3V9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Carmil2Q3V3V9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.58■■□□□ 1.04
Carmil2Q3V3V9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.58■■□□□ 1.04
Carmil2Q3V3V9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Carmil2Q3V3V9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms