Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cnga4Q3UW12 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cnga4Q3UW12 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Cnga4Q3UW12 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cnga4Q3UW12 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cnga4Q3UW12 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cnga4Q3UW12 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cnga4Q3UW12 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cnga4Q3UW12 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cnga4Q3UW12 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cnga4Q3UW12 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cnga4Q3UW12 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cnga4Q3UW12 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cnga4Q3UW12 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cnga4Q3UW12 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Gm13238-201ENSMUST00000117655 780 ntBASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Gm43530-201ENSMUST00000195920 274 ntBASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Gm43566-201ENSMUST00000196851 808 ntBASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cnga4Q3UW12 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms