Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsmem1Q3UQS2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Lsmem1Q3UQS2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lsmem1Q3UQS2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Lsmem1Q3UQS2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsmem1Q3UQS2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lsmem1Q3UQS2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.72■□□□□ 0.75
Lsmem1Q3UQS2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.71■□□□□ 0.75
Lsmem1Q3UQS2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lsmem1Q3UQS2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lsmem1Q3UQS2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsmem1Q3UQS2 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.69■□□□□ 0.74
Lsmem1Q3UQS2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Lsmem1Q3UQS2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lsmem1Q3UQS2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsmem1Q3UQS2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lsmem1Q3UQS2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lsmem1Q3UQS2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsmem1Q3UQS2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Lsmem1Q3UQS2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsmem1Q3UQS2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsmem1Q3UQS2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.64■□□□□ 0.73
Lsmem1Q3UQS2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lsmem1Q3UQS2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms