Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Naf1Q3UMQ8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Naf1Q3UMQ8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Naf1Q3UMQ8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.7■□□□□ 0.74
Naf1Q3UMQ8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Naf1Q3UMQ8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Naf1Q3UMQ8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Naf1Q3UMQ8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.68■□□□□ 0.74
Naf1Q3UMQ8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Naf1Q3UMQ8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Naf1Q3UMQ8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Naf1Q3UMQ8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.65■□□□□ 0.74
Naf1Q3UMQ8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Naf1Q3UMQ8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Naf1Q3UMQ8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms