Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx27Q3UHD6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx27Q3UHD6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Snx27Q3UHD6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Snx27Q3UHD6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx27Q3UHD6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snx27Q3UHD6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx27Q3UHD6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Snx27Q3UHD6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx27Q3UHD6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Snx27Q3UHD6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx27Q3UHD6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21■□□□□ 0.95
Snx27Q3UHD6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx27Q3UHD6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21■□□□□ 0.95
Snx27Q3UHD6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Gm12933-201ENSMUST00000120203 872 ntBASIC20.99■□□□□ 0.95
Snx27Q3UHD6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Snx27Q3UHD6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx27Q3UHD6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx27Q3UHD6 Gm7860-201ENSMUST00000121190 879 ntBASIC20.98■□□□□ 0.95
Snx27Q3UHD6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Snx27Q3UHD6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx27Q3UHD6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx27Q3UHD6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Snx27Q3UHD6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Snx27Q3UHD6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx27Q3UHD6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Snx27Q3UHD6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.96■□□□□ 0.95
Snx27Q3UHD6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Snx27Q3UHD6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.96■□□□□ 0.95
Snx27Q3UHD6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.96■□□□□ 0.95
Snx27Q3UHD6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx27Q3UHD6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Gm13534-201ENSMUST00000121169 513 ntBASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx27Q3UHD6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Notumos-201ENSMUST00000151998 2659 ntBASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.93■□□□□ 0.94
Snx27Q3UHD6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Snx27Q3UHD6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms