Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf149Q3U2C5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf149Q3U2C5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf149Q3U2C5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rnf149Q3U2C5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf149Q3U2C5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf149Q3U2C5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf149Q3U2C5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf149Q3U2C5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf149Q3U2C5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf149Q3U2C5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rnf149Q3U2C5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf149Q3U2C5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
Rnf149Q3U2C5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Rnf149Q3U2C5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf149Q3U2C5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Rnf149Q3U2C5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Rnf149Q3U2C5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Rnf149Q3U2C5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf149Q3U2C5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Rnf149Q3U2C5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf149Q3U2C5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rnf149Q3U2C5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.26■□□□□ 0.35
Rnf149Q3U2C5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf149Q3U2C5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf149Q3U2C5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms