Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml4Q3LRV9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml4Q3LRV9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml4Q3LRV9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml4Q3LRV9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Treml4Q3LRV9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml4Q3LRV9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml4Q3LRV9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Treml4Q3LRV9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Treml4Q3LRV9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.14■□□□□ 0.49
Treml4Q3LRV9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml4Q3LRV9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml4Q3LRV9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml4Q3LRV9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml4Q3LRV9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.11■□□□□ 0.49
Treml4Q3LRV9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Gm10653-202ENSMUST00000139570 835 ntBASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Gm8520-201ENSMUST00000186517 868 ntBASIC18.11■□□□□ 0.49
Treml4Q3LRV9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml4Q3LRV9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.1■□□□□ 0.49
Treml4Q3LRV9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml4Q3LRV9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Treml4Q3LRV9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml4Q3LRV9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Treml4Q3LRV9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Treml4Q3LRV9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Treml4Q3LRV9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Treml4Q3LRV9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Treml4Q3LRV9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Treml4Q3LRV9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Treml4Q3LRV9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Treml4Q3LRV9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.08■□□□□ 0.48
Treml4Q3LRV9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Treml4Q3LRV9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms