Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim72Q1XH17 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim72Q1XH17 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim72Q1XH17 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim72Q1XH17 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim72Q1XH17 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim72Q1XH17 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim72Q1XH17 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim72Q1XH17 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim72Q1XH17 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim72Q1XH17 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Trim72Q1XH17 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.66■□□□□ 0.9
Trim72Q1XH17 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim72Q1XH17 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim72Q1XH17 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim72Q1XH17 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim72Q1XH17 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim72Q1XH17 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim72Q1XH17 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim72Q1XH17 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim72Q1XH17 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.65■□□□□ 0.9
Trim72Q1XH17 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim72Q1XH17 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim72Q1XH17 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trim72Q1XH17 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim72Q1XH17 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim72Q1XH17 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim72Q1XH17 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim72Q1XH17 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim72Q1XH17 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Gm26833-201ENSMUST00000180899 440 ntBASIC20.64■□□□□ 0.89
Trim72Q1XH17 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Gm43017-201ENSMUST00000198296 752 ntBASIC20.64■□□□□ 0.89
Trim72Q1XH17 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim72Q1XH17 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim72Q1XH17 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim72Q1XH17 Golph3-202ENSMUST00000226517 2359 ntBASIC20.63■□□□□ 0.89
Trim72Q1XH17 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.63■□□□□ 0.89
Trim72Q1XH17 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim72Q1XH17 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim72Q1XH17 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim72Q1XH17 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim72Q1XH17 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim72Q1XH17 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim72Q1XH17 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim72Q1XH17 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim72Q1XH17 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim72Q1XH17 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim72Q1XH17 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim72Q1XH17 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.61■□□□□ 0.89
Trim72Q1XH17 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim72Q1XH17 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.6■□□□□ 0.89
Trim72Q1XH17 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim72Q1XH17 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.59■□□□□ 0.89
Trim72Q1XH17 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim72Q1XH17 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim72Q1XH17 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim72Q1XH17 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim72Q1XH17 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim72Q1XH17 Gm27801-201ENSMUST00000184174 223 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms