Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hoxc4Q08624 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.71■□□□□ 0.59
Hoxc4Q08624 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc4Q08624 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hoxc4Q08624 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.7■□□□□ 0.58
Hoxc4Q08624 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc4Q08624 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc4Q08624 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hoxc4Q08624 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc4Q08624 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc4Q08624 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.7■□□□□ 0.58
Hoxc4Q08624 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Hoxc4Q08624 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc4Q08624 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc4Q08624 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hoxc4Q08624 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.69■□□□□ 0.58
Hoxc4Q08624 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Gm10602-201ENSMUST00000098239 609 ntBASIC18.69■□□□□ 0.58
Hoxc4Q08624 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hoxc4Q08624 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hoxc4Q08624 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc4Q08624 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc4Q08624 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hoxc4Q08624 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc4Q08624 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hoxc4Q08624 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.67■□□□□ 0.58
Hoxc4Q08624 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.67■□□□□ 0.58
Hoxc4Q08624 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hoxc4Q08624 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc4Q08624 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.67■□□□□ 0.58
Hoxc4Q08624 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hoxc4Q08624 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.66■□□□□ 0.58
Hoxc4Q08624 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Hoxc4Q08624 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.65■□□□□ 0.58
Hoxc4Q08624 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.65■□□□□ 0.58
Hoxc4Q08624 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.65■□□□□ 0.58
Hoxc4Q08624 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxc4Q08624 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxc4Q08624 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Gm7290-201ENSMUST00000104990 617 ntBASIC18.64■□□□□ 0.57
Hoxc4Q08624 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Gm12918-201ENSMUST00000120234 636 ntBASIC18.64■□□□□ 0.57
Hoxc4Q08624 Gm15710-201ENSMUST00000121821 636 ntBASIC18.64■□□□□ 0.57
Hoxc4Q08624 Gm5075-201ENSMUST00000196916 622 ntBASIC18.64■□□□□ 0.57
Hoxc4Q08624 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.64■□□□□ 0.57
Hoxc4Q08624 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.64■□□□□ 0.57
Hoxc4Q08624 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.64■□□□□ 0.57
Hoxc4Q08624 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxc4Q08624 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxc4Q08624 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms