Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Brca2P97929 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.97■□□□□ 0.63
Brca2P97929 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca2P97929 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Brca2P97929 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca2P97929 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Brca2P97929 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Brca2P97929 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca2P97929 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca2P97929 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca2P97929 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Brca2P97929 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.95■□□□□ 0.62
Brca2P97929 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.95■□□□□ 0.62
Brca2P97929 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.95■□□□□ 0.62
Brca2P97929 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Brca2P97929 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Brca2P97929 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Brca2P97929 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.94■□□□□ 0.62
Brca2P97929 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Gm6576-201ENSMUST00000169678 883 ntBASIC18.94■□□□□ 0.62
Brca2P97929 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Brca2P97929 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Gm13534-201ENSMUST00000121169 513 ntBASIC18.94■□□□□ 0.62
Brca2P97929 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.94■□□□□ 0.62
Brca2P97929 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Brca2P97929 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.94■□□□□ 0.62
Brca2P97929 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Brca2P97929 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.94■□□□□ 0.62
Brca2P97929 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Brca2P97929 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.93■□□□□ 0.62
Brca2P97929 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Brca2P97929 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.93■□□□□ 0.62
Brca2P97929 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.93■□□□□ 0.62
Brca2P97929 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Brca2P97929 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.92■□□□□ 0.62
Brca2P97929 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Brca2P97929 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Brca2P97929 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.92■□□□□ 0.62
Brca2P97929 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.92■□□□□ 0.62
Brca2P97929 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.92■□□□□ 0.62
Brca2P97929 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca2P97929 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.91■□□□□ 0.62
Brca2P97929 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.91■□□□□ 0.62
Brca2P97929 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.91■□□□□ 0.62
Brca2P97929 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca2P97929 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Brca2P97929 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.91■□□□□ 0.62
Brca2P97929 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Brca2P97929 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Brca2P97929 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Brca2P97929 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca2P97929 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca2P97929 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca2P97929 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca2P97929 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca2P97929 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.9■□□□□ 0.62
Brca2P97929 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.9■□□□□ 0.62
Brca2P97929 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.9■□□□□ 0.62
Brca2P97929 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.9■□□□□ 0.62
Brca2P97929 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Brca2P97929 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.9■□□□□ 0.62
Brca2P97929 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Brca2P97929 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms