Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43bP86448 Gm27454-201ENSMUST00000185090 204 ntBASIC19.83■□□□□ 0.77
Trim43bP86448 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.83■□□□□ 0.77
Trim43bP86448 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43bP86448 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43bP86448 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43bP86448 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim43bP86448 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43bP86448 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43bP86448 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43bP86448 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43bP86448 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43bP86448 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43bP86448 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim43bP86448 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43bP86448 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim43bP86448 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim43bP86448 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim43bP86448 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43bP86448 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trim43bP86448 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43bP86448 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trim43bP86448 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.79■□□□□ 0.76
Trim43bP86448 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.79■□□□□ 0.76
Trim43bP86448 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.79■□□□□ 0.76
Trim43bP86448 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43bP86448 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.79■□□□□ 0.76
Trim43bP86448 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trim43bP86448 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43bP86448 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43bP86448 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43bP86448 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43bP86448 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim43bP86448 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43bP86448 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43bP86448 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43bP86448 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43bP86448 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43bP86448 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43bP86448 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43bP86448 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim43bP86448 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim43bP86448 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Trim43bP86448 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim43bP86448 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim43bP86448 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43bP86448 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43bP86448 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim43bP86448 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trim43bP86448 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.75■□□□□ 0.75
Trim43bP86448 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trim43bP86448 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43bP86448 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43bP86448 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Trim43bP86448 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43bP86448 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim43bP86448 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.74■□□□□ 0.75
Trim43bP86448 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.74■□□□□ 0.75
Trim43bP86448 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim43bP86448 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms