Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SgcaP82350 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SgcaP82350 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Gm10420-201ENSMUST00000121713 882 ntBASIC16.18■□□□□ 0.18
SgcaP82350 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.18■□□□□ 0.18
SgcaP82350 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SgcaP82350 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SgcaP82350 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SgcaP82350 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SgcaP82350 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SgcaP82350 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SgcaP82350 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SgcaP82350 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SgcaP82350 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SgcaP82350 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SgcaP82350 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.16■□□□□ 0.18
SgcaP82350 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SgcaP82350 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.16■□□□□ 0.18
SgcaP82350 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SgcaP82350 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SgcaP82350 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcaP82350 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SgcaP82350 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SgcaP82350 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SgcaP82350 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.15■□□□□ 0.18
SgcaP82350 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SgcaP82350 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcaP82350 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SgcaP82350 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcaP82350 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcaP82350 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcaP82350 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SgcaP82350 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SgcaP82350 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SgcaP82350 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SgcaP82350 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SgcaP82350 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SgcaP82350 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcaP82350 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SgcaP82350 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.13■□□□□ 0.17
SgcaP82350 Gm12366-201ENSMUST00000121722 873 ntBASIC16.13■□□□□ 0.17
SgcaP82350 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.13■□□□□ 0.17
SgcaP82350 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.13■□□□□ 0.17
SgcaP82350 Gm5786-201ENSMUST00000085368 882 ntBASIC16.13■□□□□ 0.17
SgcaP82350 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SgcaP82350 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcaP82350 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SgcaP82350 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms