Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.28■□□□□ 0.36
SgcbP82349 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
SgcbP82349 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgcbP82349 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SgcbP82349 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SgcbP82349 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SgcbP82349 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SgcbP82349 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.27■□□□□ 0.36
SgcbP82349 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SgcbP82349 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SgcbP82349 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
SgcbP82349 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgcbP82349 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SgcbP82349 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.27■□□□□ 0.35
SgcbP82349 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.27■□□□□ 0.35
SgcbP82349 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SgcbP82349 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SgcbP82349 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.26■□□□□ 0.35
SgcbP82349 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.26■□□□□ 0.35
SgcbP82349 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SgcbP82349 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SgcbP82349 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgcbP82349 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SgcbP82349 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.25■□□□□ 0.35
SgcbP82349 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SgcbP82349 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.25■□□□□ 0.35
SgcbP82349 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SgcbP82349 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SgcbP82349 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgcbP82349 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SgcbP82349 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgcbP82349 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SgcbP82349 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcbP82349 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.24■□□□□ 0.35
SgcbP82349 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcbP82349 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SgcbP82349 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SgcbP82349 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcbP82349 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcbP82349 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgcbP82349 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgcbP82349 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
SgcbP82349 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcbP82349 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcbP82349 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcbP82349 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcbP82349 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcbP82349 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcbP82349 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SgcbP82349 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SgcbP82349 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcbP82349 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SgcbP82349 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SgcbP82349 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SgcbP82349 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.22■□□□□ 0.35
SgcbP82349 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SgcbP82349 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.22■□□□□ 0.35
SgcbP82349 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.22■□□□□ 0.35
SgcbP82349 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcbP82349 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcbP82349 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SgcbP82349 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcbP82349 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SgcbP82349 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SgcbP82349 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.21■□□□□ 0.35
SgcbP82349 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SgcbP82349 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.21■□□□□ 0.35
SgcbP82349 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms