Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf1P81269 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Atf1P81269 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf1P81269 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf1P81269 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf1P81269 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf1P81269 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Atf1P81269 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf1P81269 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Atf1P81269 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Atf1P81269 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Atf1P81269 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.7■□□□□ 0.26
Atf1P81269 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf1P81269 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.69■□□□□ 0.26
Atf1P81269 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.69■□□□□ 0.26
Atf1P81269 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Atf1P81269 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.69■□□□□ 0.26
Atf1P81269 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf1P81269 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Atf1P81269 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Atf1P81269 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.68■□□□□ 0.26
Atf1P81269 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Serp2-204ENSMUST00000228055 705 ntBASIC16.68■□□□□ 0.26
Atf1P81269 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.68■□□□□ 0.26
Atf1P81269 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Atf1P81269 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Atf1P81269 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atf1P81269 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf1P81269 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.67■□□□□ 0.26
Atf1P81269 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf1P81269 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Atf1P81269 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.67■□□□□ 0.26
Atf1P81269 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.67■□□□□ 0.26
Atf1P81269 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Atf1P81269 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf1P81269 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf1P81269 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf1P81269 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf1P81269 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.67■□□□□ 0.26
Atf1P81269 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf1P81269 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.67■□□□□ 0.26
Atf1P81269 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atf1P81269 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.67■□□□□ 0.26
Atf1P81269 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Atf1P81269 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atf1P81269 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.66■□□□□ 0.26
Atf1P81269 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atf1P81269 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.66■□□□□ 0.26
Atf1P81269 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf1P81269 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Atf1P81269 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Atf1P81269 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf1P81269 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf1P81269 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms