Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Traf6P70196 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Traf6P70196 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Traf6P70196 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19■□□□□ 0.63
Traf6P70196 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19■□□□□ 0.63
Traf6P70196 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Traf6P70196 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Traf6P70196 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Traf6P70196 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Traf6P70196 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Traf6P70196 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Traf6P70196 Golgb1-201ENSMUST00000023534 498 ntBASIC18.99■□□□□ 0.63
Traf6P70196 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Traf6P70196 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Traf6P70196 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Traf6P70196 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf6P70196 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf6P70196 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf6P70196 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.98■□□□□ 0.63
Traf6P70196 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf6P70196 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Traf6P70196 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf6P70196 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.98■□□□□ 0.63
Traf6P70196 AA386476-201ENSMUST00000098781 1665 ntBASIC18.98■□□□□ 0.63
Traf6P70196 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Traf6P70196 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Traf6P70196 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Traf6P70196 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Traf6P70196 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Traf6P70196 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.97■□□□□ 0.63
Traf6P70196 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.97■□□□□ 0.63
Traf6P70196 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.97■□□□□ 0.63
Traf6P70196 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Traf6P70196 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Traf6P70196 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.96■□□□□ 0.63
Traf6P70196 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Traf6P70196 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Traf6P70196 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Traf6P70196 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.96■□□□□ 0.63
Traf6P70196 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.96■□□□□ 0.63
Traf6P70196 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.96■□□□□ 0.63
Traf6P70196 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
Traf6P70196 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Traf6P70196 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Traf6P70196 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Traf6P70196 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Traf6P70196 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.94■□□□□ 0.62
Traf6P70196 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Traf6P70196 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.94■□□□□ 0.62
Traf6P70196 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Gm9847-201ENSMUST00000052528 599 ntBASIC18.94■□□□□ 0.62
Traf6P70196 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Traf6P70196 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Traf6P70196 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Traf6P70196 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.93■□□□□ 0.62
Traf6P70196 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Gm13241-201ENSMUST00000094493 780 ntBASIC18.93■□□□□ 0.62
Traf6P70196 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Traf6P70196 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.92■□□□□ 0.62
Traf6P70196 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Traf6P70196 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms