Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx1P63006 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx1P63006 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx1P63006 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx1P63006 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx1P63006 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx1P63006 Gm10849-201ENSMUST00000100397 618 ntBASIC19.06■□□□□ 0.64
Lhx1P63006 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx1P63006 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lhx1P63006 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx1P63006 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx1P63006 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lhx1P63006 Reep4-203ENSMUST00000226563 1444 ntBASIC19.06■□□□□ 0.64
Lhx1P63006 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Lhx1P63006 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx1P63006 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx1P63006 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.05■□□□□ 0.64
Lhx1P63006 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx1P63006 Gm26571-201ENSMUST00000181399 666 ntBASIC19.05■□□□□ 0.64
Lhx1P63006 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.05■□□□□ 0.64
Lhx1P63006 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.05■□□□□ 0.64
Lhx1P63006 AV356131-201ENSMUST00000206201 750 ntBASIC19.05■□□□□ 0.64
Lhx1P63006 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.05■□□□□ 0.64
Lhx1P63006 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lhx1P63006 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lhx1P63006 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx1P63006 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx1P63006 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx1P63006 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx1P63006 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx1P63006 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx1P63006 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lhx1P63006 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Lhx1P63006 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx1P63006 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx1P63006 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx1P63006 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.03■□□□□ 0.64
Lhx1P63006 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx1P63006 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.03■□□□□ 0.64
Lhx1P63006 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lhx1P63006 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.02■□□□□ 0.64
Lhx1P63006 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Lhx1P63006 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Lhx1P63006 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Lhx1P63006 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx1P63006 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Lhx1P63006 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx1P63006 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.02■□□□□ 0.64
Lhx1P63006 Gm27405-201ENSMUST00000184201 112 ntBASIC19.02■□□□□ 0.64
Lhx1P63006 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.02■□□□□ 0.64
Lhx1P63006 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.02■□□□□ 0.64
Lhx1P63006 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx1P63006 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lhx1P63006 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx1P63006 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lhx1P63006 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lhx1P63006 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lhx1P63006 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Lhx1P63006 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.01■□□□□ 0.63
Lhx1P63006 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.01■□□□□ 0.63
Lhx1P63006 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.01■□□□□ 0.63
Lhx1P63006 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lhx1P63006 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lhx1P63006 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19■□□□□ 0.63
Lhx1P63006 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx1P63006 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lhx1P63006 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lhx1P63006 Gm7291-201ENSMUST00000199147 382 ntBASIC19■□□□□ 0.63
Lhx1P63006 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lhx1P63006 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx1P63006 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19■□□□□ 0.63
Lhx1P63006 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx1P63006 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx1P63006 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx1P63006 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Lhx1P63006 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.99■□□□□ 0.63
Lhx1P63006 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx1P63006 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx1P63006 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx1P63006 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx1P63006 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx1P63006 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.99■□□□□ 0.63
Lhx1P63006 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx1P63006 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Lhx1P63006 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lhx1P63006 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.98■□□□□ 0.63
Lhx1P63006 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx1P63006 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.98■□□□□ 0.63
Lhx1P63006 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms