Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.96■□□□□ 0.31
Lsm6P62313 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.96■□□□□ 0.31
Lsm6P62313 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm6P62313 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.96■□□□□ 0.31
Lsm6P62313 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm6P62313 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.95■□□□□ 0.3
Lsm6P62313 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.95■□□□□ 0.3
Lsm6P62313 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.95■□□□□ 0.3
Lsm6P62313 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.95■□□□□ 0.3
Lsm6P62313 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Lsm6P62313 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm6P62313 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.94■□□□□ 0.3
Lsm6P62313 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.94■□□□□ 0.3
Lsm6P62313 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.94■□□□□ 0.3
Lsm6P62313 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Lsm6P62313 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm6P62313 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm6P62313 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm6P62313 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Lsm6P62313 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm6P62313 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm6P62313 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm6P62313 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.93■□□□□ 0.3
Lsm6P62313 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.93■□□□□ 0.3
Lsm6P62313 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Lsm6P62313 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm6P62313 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm6P62313 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Lsm6P62313 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Lsm6P62313 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lsm6P62313 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.92■□□□□ 0.3
Lsm6P62313 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lsm6P62313 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm6P62313 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.91■□□□□ 0.3
Lsm6P62313 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Lsm6P62313 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.91■□□□□ 0.3
Lsm6P62313 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Gm27454-201ENSMUST00000185090 204 ntBASIC16.91■□□□□ 0.3
Lsm6P62313 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm6P62313 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.91■□□□□ 0.3
Lsm6P62313 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm6P62313 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lsm6P62313 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm6P62313 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lsm6P62313 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lsm6P62313 Gm8493-201ENSMUST00000196881 489 ntBASIC16.9■□□□□ 0.3
Lsm6P62313 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm6P62313 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lsm6P62313 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lsm6P62313 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm6P62313 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lsm6P62313 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm6P62313 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Lsm6P62313 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm6P62313 Smad6-203ENSMUST00000179458 273 ntBASIC16.89■□□□□ 0.29
Lsm6P62313 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm6P62313 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lsm6P62313 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms