Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lsm3P62311 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.69■□□□□ 0.42
Lsm3P62311 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.69■□□□□ 0.42
Lsm3P62311 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.69■□□□□ 0.42
Lsm3P62311 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Lsm3P62311 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Gm9806-201ENSMUST00000051080 552 ntBASIC17.69■□□□□ 0.42
Lsm3P62311 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lsm3P62311 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
Lsm3P62311 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lsm3P62311 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm3P62311 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lsm3P62311 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.68■□□□□ 0.42
Lsm3P62311 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.68■□□□□ 0.42
Lsm3P62311 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm3P62311 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm3P62311 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lsm3P62311 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.67■□□□□ 0.42
Lsm3P62311 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.66■□□□□ 0.42
Lsm3P62311 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm3P62311 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm3P62311 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm3P62311 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.66■□□□□ 0.42
Lsm3P62311 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm3P62311 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm3P62311 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm3P62311 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lsm3P62311 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm3P62311 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
Lsm3P62311 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.66■□□□□ 0.42
Lsm3P62311 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.66■□□□□ 0.42
Lsm3P62311 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm3P62311 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm3P62311 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lsm3P62311 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm3P62311 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm3P62311 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lsm3P62311 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm3P62311 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm3P62311 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Lsm3P62311 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Lsm3P62311 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.64■□□□□ 0.41
Lsm3P62311 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lsm3P62311 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.64■□□□□ 0.41
Lsm3P62311 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Lsm3P62311 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lsm3P62311 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lsm3P62311 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lsm3P62311 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm3P62311 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lsm3P62311 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Lsm3P62311 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.63■□□□□ 0.41
Lsm3P62311 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms