Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.95■□□□□ 0.3
Sec61a1P61620 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Sec61a1P61620 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Sec61a1P61620 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sec61a1P61620 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.95■□□□□ 0.3
Sec61a1P61620 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.95■□□□□ 0.3
Sec61a1P61620 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sec61a1P61620 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sec61a1P61620 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.94■□□□□ 0.3
Sec61a1P61620 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.94■□□□□ 0.3
Sec61a1P61620 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Sec61a1P61620 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sec61a1P61620 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sec61a1P61620 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.93■□□□□ 0.3
Sec61a1P61620 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.93■□□□□ 0.3
Sec61a1P61620 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.92■□□□□ 0.3
Sec61a1P61620 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a1P61620 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Sec61a1P61620 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a1P61620 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a1P61620 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a1P61620 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a1P61620 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sec61a1P61620 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.92■□□□□ 0.3
Sec61a1P61620 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.92■□□□□ 0.3
Sec61a1P61620 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.91■□□□□ 0.3
Sec61a1P61620 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Sec61a1P61620 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sec61a1P61620 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sec61a1P61620 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.9■□□□□ 0.3
Sec61a1P61620 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Gm27454-201ENSMUST00000185090 204 ntBASIC16.9■□□□□ 0.3
Sec61a1P61620 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.9■□□□□ 0.3
Sec61a1P61620 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.9■□□□□ 0.3
Sec61a1P61620 Gm7143-201ENSMUST00000222811 859 ntBASIC16.9■□□□□ 0.3
Sec61a1P61620 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sec61a1P61620 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sec61a1P61620 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sec61a1P61620 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.9■□□□□ 0.3
Sec61a1P61620 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sec61a1P61620 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sec61a1P61620 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a1P61620 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.89■□□□□ 0.29
Sec61a1P61620 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sec61a1P61620 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a1P61620 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a1P61620 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a1P61620 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a1P61620 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a1P61620 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Sec61a1P61620 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sec61a1P61620 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms