Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cks1bP61025 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cks1bP61025 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.74□□□□□ -0.21
Cks1bP61025 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.74□□□□□ -0.21
Cks1bP61025 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.74□□□□□ -0.21
Cks1bP61025 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cks1bP61025 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cks1bP61025 Gm14523-201ENSMUST00000117260 558 ntBASIC13.73□□□□□ -0.21
Cks1bP61025 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.73□□□□□ -0.21
Cks1bP61025 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.73□□□□□ -0.21
Cks1bP61025 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Cks1bP61025 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cks1bP61025 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.72□□□□□ -0.21
Cks1bP61025 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.72□□□□□ -0.21
Cks1bP61025 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cks1bP61025 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cks1bP61025 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.72□□□□□ -0.21
Cks1bP61025 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Gm7332-201ENSMUST00000118351 454 ntBASIC13.72□□□□□ -0.21
Cks1bP61025 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.72□□□□□ -0.21
Cks1bP61025 Gm27502-201ENSMUST00000183495 199 ntBASIC13.72□□□□□ -0.21
Cks1bP61025 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cks1bP61025 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1bP61025 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1bP61025 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.71□□□□□ -0.21
Cks1bP61025 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1bP61025 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.71□□□□□ -0.21
Cks1bP61025 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1bP61025 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1bP61025 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1bP61025 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cks1bP61025 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Cks1bP61025 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.71□□□□□ -0.22
Cks1bP61025 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cks1bP61025 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.71□□□□□ -0.22
Cks1bP61025 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cks1bP61025 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Cks1bP61025 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.7□□□□□ -0.22
Cks1bP61025 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.7□□□□□ -0.22
Cks1bP61025 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Cks1bP61025 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.7□□□□□ -0.22
Cks1bP61025 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks1bP61025 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cks1bP61025 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cks1bP61025 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks1bP61025 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks1bP61025 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms