Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nub1P54729 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.83■□□□□ 0.93
Nub1P54729 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nub1P54729 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nub1P54729 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nub1P54729 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nub1P54729 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nub1P54729 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Nub1P54729 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nub1P54729 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nub1P54729 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.82■□□□□ 0.92
Nub1P54729 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nub1P54729 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nub1P54729 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nub1P54729 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nub1P54729 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nub1P54729 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nub1P54729 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nub1P54729 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.81■□□□□ 0.92
Nub1P54729 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nub1P54729 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nub1P54729 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nub1P54729 Gm26833-201ENSMUST00000180899 440 ntBASIC20.8■□□□□ 0.92
Nub1P54729 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nub1P54729 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nub1P54729 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nub1P54729 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nub1P54729 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.79■□□□□ 0.92
Nub1P54729 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Nub1P54729 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Gm40848-201ENSMUST00000221998 324 ntBASIC20.79■□□□□ 0.92
Nub1P54729 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nub1P54729 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Nub1P54729 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.78■□□□□ 0.92
Nub1P54729 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.78■□□□□ 0.92
Nub1P54729 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Nub1P54729 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nub1P54729 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nub1P54729 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nub1P54729 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nub1P54729 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nub1P54729 Gm11421-201ENSMUST00000122124 294 ntBASIC20.77■□□□□ 0.92
Nub1P54729 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.77■□□□□ 0.92
Nub1P54729 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.77■□□□□ 0.92
Nub1P54729 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nub1P54729 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nub1P54729 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nub1P54729 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nub1P54729 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nub1P54729 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nub1P54729 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.76■□□□□ 0.91
Nub1P54729 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nub1P54729 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.76■□□□□ 0.91
Nub1P54729 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nub1P54729 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nub1P54729 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nub1P54729 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nub1P54729 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nub1P54729 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.75■□□□□ 0.91
Nub1P54729 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Nub1P54729 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.75■□□□□ 0.91
Nub1P54729 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nub1P54729 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nub1P54729 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nub1P54729 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nub1P54729 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nub1P54729 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nub1P54729 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nub1P54729 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Nub1P54729 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nub1P54729 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nub1P54729 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nub1P54729 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nub1P54729 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms