Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fdft1P53798 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fdft1P53798 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fdft1P53798 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Fdft1P53798 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fdft1P53798 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.25■□□□□ 0.67
Fdft1P53798 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fdft1P53798 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fdft1P53798 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fdft1P53798 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fdft1P53798 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Fdft1P53798 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Fdft1P53798 Gm21956-201ENSMUST00000179946 522 ntBASIC19.24■□□□□ 0.67
Fdft1P53798 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.24■□□□□ 0.67
Fdft1P53798 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fdft1P53798 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.23■□□□□ 0.67
Fdft1P53798 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.23■□□□□ 0.67
Fdft1P53798 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.23■□□□□ 0.67
Fdft1P53798 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Fdft1P53798 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fdft1P53798 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Fdft1P53798 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Fdft1P53798 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Fdft1P53798 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.22■□□□□ 0.67
Fdft1P53798 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fdft1P53798 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Fdft1P53798 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fdft1P53798 Gm43137-201ENSMUST00000198052 594 ntBASIC19.21■□□□□ 0.67
Fdft1P53798 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Fdft1P53798 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fdft1P53798 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.21■□□□□ 0.67
Fdft1P53798 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.21■□□□□ 0.67
Fdft1P53798 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fdft1P53798 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fdft1P53798 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fdft1P53798 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.2■□□□□ 0.66
Fdft1P53798 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.2■□□□□ 0.66
Fdft1P53798 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.2■□□□□ 0.66
Fdft1P53798 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Fdft1P53798 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 AA386476-201ENSMUST00000098781 1665 ntBASIC19.2■□□□□ 0.66
Fdft1P53798 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fdft1P53798 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Fdft1P53798 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fdft1P53798 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fdft1P53798 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fdft1P53798 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Fdft1P53798 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Fdft1P53798 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fdft1P53798 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fdft1P53798 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fdft1P53798 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fdft1P53798 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fdft1P53798 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Fdft1P53798 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fdft1P53798 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fdft1P53798 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Fdft1P53798 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fdft1P53798 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.18■□□□□ 0.66
Fdft1P53798 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fdft1P53798 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fdft1P53798 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fdft1P53798 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fdft1P53798 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fdft1P53798 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fdft1P53798 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms