Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Sox1P53783 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox1P53783 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sox1P53783 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox1P53783 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Sox1P53783 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox1P53783 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox1P53783 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox1P53783 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox1P53783 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sox1P53783 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sox1P53783 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.94■□□□□ 0.78
Sox1P53783 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
Sox1P53783 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.94■□□□□ 0.78
Sox1P53783 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sox1P53783 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sox1P53783 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.94■□□□□ 0.78
Sox1P53783 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox1P53783 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox1P53783 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sox1P53783 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox1P53783 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.92■□□□□ 0.78
Sox1P53783 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.92■□□□□ 0.78
Sox1P53783 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Sox1P53783 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.92■□□□□ 0.78
Sox1P53783 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox1P53783 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox1P53783 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox1P53783 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.91■□□□□ 0.78
Sox1P53783 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
Sox1P53783 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox1P53783 Mir5122-201ENSMUST00000175004 89 ntBASIC19.91■□□□□ 0.78
Sox1P53783 Gm18666-201ENSMUST00000190039 958 ntBASIC19.91■□□□□ 0.78
Sox1P53783 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Sox1P53783 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox1P53783 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.91■□□□□ 0.78
Sox1P53783 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sox1P53783 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox1P53783 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox1P53783 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sox1P53783 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox1P53783 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.9■□□□□ 0.78
Sox1P53783 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.9■□□□□ 0.78
Sox1P53783 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Sox1P53783 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.9■□□□□ 0.78
Sox1P53783 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Sox1P53783 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 Gm5417-201ENSMUST00000079706 384 ntBASIC19.9■□□□□ 0.78
Sox1P53783 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox1P53783 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sox1P53783 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Sox1P53783 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.89■□□□□ 0.77
Sox1P53783 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox1P53783 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sox1P53783 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox1P53783 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sox1P53783 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox1P53783 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox1P53783 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.88■□□□□ 0.77
Sox1P53783 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.88■□□□□ 0.77
Sox1P53783 Gm15378-201ENSMUST00000121894 207 ntBASIC19.88■□□□□ 0.77
Sox1P53783 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.88■□□□□ 0.77
Sox1P53783 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sox1P53783 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sox1P53783 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sox1P53783 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox1P53783 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sox1P53783 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sox1P53783 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms