Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx4P53776 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx4P53776 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx4P53776 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.32■□□□□ 0.2
Lhx4P53776 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lhx4P53776 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx4P53776 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lhx4P53776 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Lhx4P53776 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Lhx4P53776 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Lhx4P53776 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Lhx4P53776 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lhx4P53776 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Lhx4P53776 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx4P53776 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lhx4P53776 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Lhx4P53776 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.3■□□□□ 0.2
Lhx4P53776 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx4P53776 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx4P53776 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx4P53776 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.29■□□□□ 0.2
Lhx4P53776 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.29■□□□□ 0.2
Lhx4P53776 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lhx4P53776 Gm43017-201ENSMUST00000198296 752 ntBASIC16.29■□□□□ 0.2
Lhx4P53776 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Lhx4P53776 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lhx4P53776 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lhx4P53776 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lhx4P53776 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.28■□□□□ 0.2
Lhx4P53776 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lhx4P53776 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.28■□□□□ 0.2
Lhx4P53776 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.28■□□□□ 0.2
Lhx4P53776 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lhx4P53776 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lhx4P53776 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.28■□□□□ 0.2
Lhx4P53776 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.27■□□□□ 0.2
Lhx4P53776 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx4P53776 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx4P53776 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx4P53776 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx4P53776 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.27■□□□□ 0.2
Lhx4P53776 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx4P53776 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lhx4P53776 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.27■□□□□ 0.2
Lhx4P53776 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx4P53776 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx4P53776 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lhx4P53776 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lhx4P53776 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx4P53776 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx4P53776 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx4P53776 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx4P53776 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx4P53776 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.26■□□□□ 0.19
Lhx4P53776 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lhx4P53776 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx4P53776 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lhx4P53776 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lhx4P53776 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.26■□□□□ 0.19
Lhx4P53776 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms