Protein–RNA interactions for Protein: P51791

Clcn3, H(+)/Cl(-) exchange transporter 3, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3P51791 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clcn3P51791 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn3P51791 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn3P51791 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clcn3P51791 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn3P51791 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Clcn3P51791 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcn3P51791 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcn3P51791 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Clcn3P51791 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Clcn3P51791 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn3P51791 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn3P51791 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn3P51791 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.14■□□□□ 0.97
Clcn3P51791 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn3P51791 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.14■□□□□ 0.97
Clcn3P51791 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn3P51791 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.13■□□□□ 0.97
Clcn3P51791 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.13■□□□□ 0.97
Clcn3P51791 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn3P51791 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Clcn3P51791 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn3P51791 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn3P51791 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Clcn3P51791 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn3P51791 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Clcn3P51791 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn3P51791 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn3P51791 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn3P51791 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn3P51791 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clcn3P51791 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.11■□□□□ 0.97
Clcn3P51791 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn3P51791 Gm13146-201ENSMUST00000118508 780 ntBASIC21.11■□□□□ 0.97
Clcn3P51791 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn3P51791 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.11■□□□□ 0.97
Clcn3P51791 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn3P51791 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn3P51791 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clcn3P51791 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clcn3P51791 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clcn3P51791 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.1■□□□□ 0.97
Clcn3P51791 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Clcn3P51791 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn3P51791 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn3P51791 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.1■□□□□ 0.97
Clcn3P51791 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.1■□□□□ 0.97
Clcn3P51791 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn3P51791 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Clcn3P51791 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clcn3P51791 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn3P51791 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn3P51791 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Clcn3P51791 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn3P51791 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn3P51791 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.09■□□□□ 0.97
Clcn3P51791 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn3P51791 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Clcn3P51791 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn3P51791 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Clcn3P51791 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Clcn3P51791 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.08■□□□□ 0.97
Clcn3P51791 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.08■□□□□ 0.97
Clcn3P51791 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.08■□□□□ 0.97
Clcn3P51791 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.08■□□□□ 0.97
Clcn3P51791 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Clcn3P51791 Gm10602-201ENSMUST00000098239 609 ntBASIC21.08■□□□□ 0.97
Clcn3P51791 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn3P51791 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn3P51791 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn3P51791 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Clcn3P51791 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Clcn3P51791 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Clcn3P51791 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn3P51791 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.07■□□□□ 0.96
Clcn3P51791 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.07■□□□□ 0.96
Clcn3P51791 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Clcn3P51791 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn3P51791 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn3P51791 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn3P51791 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.07■□□□□ 0.96
Clcn3P51791 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clcn3P51791 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.06■□□□□ 0.96
Clcn3P51791 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.06■□□□□ 0.96
Clcn3P51791 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.06■□□□□ 0.96
Clcn3P51791 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.06■□□□□ 0.96
Clcn3P51791 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn3P51791 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn3P51791 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn3P51791 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.05■□□□□ 0.96
Clcn3P51791 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clcn3P51791 Gm12933-201ENSMUST00000120203 872 ntBASIC21.05■□□□□ 0.96
Clcn3P51791 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms