Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli1P47806 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gli1P47806 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli1P47806 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gli1P47806 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.81■□□□□ 0.6
Gli1P47806 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Gli1P47806 Gm7143-201ENSMUST00000222811 859 ntBASIC18.81■□□□□ 0.6
Gli1P47806 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gli1P47806 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gli1P47806 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Gli1P47806 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli1P47806 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli1P47806 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli1P47806 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Gli1P47806 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.8■□□□□ 0.6
Gli1P47806 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli1P47806 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gli1P47806 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli1P47806 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli1P47806 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli1P47806 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.79■□□□□ 0.6
Gli1P47806 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gli1P47806 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gli1P47806 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Golph3-205ENSMUST00000228671 2842 ntBASIC18.79■□□□□ 0.6
Gli1P47806 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli1P47806 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.79■□□□□ 0.6
Gli1P47806 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gli1P47806 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli1P47806 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli1P47806 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.78■□□□□ 0.6
Gli1P47806 Gm6139-201ENSMUST00000079261 882 ntBASIC18.78■□□□□ 0.6
Gli1P47806 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gli1P47806 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gli1P47806 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.77■□□□□ 0.6
Gli1P47806 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.77■□□□□ 0.6
Gli1P47806 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gli1P47806 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gli1P47806 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gli1P47806 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gli1P47806 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gli1P47806 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Gli1P47806 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gli1P47806 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gli1P47806 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Gli1P47806 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gli1P47806 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.75■□□□□ 0.59
Gli1P47806 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.75■□□□□ 0.59
Gli1P47806 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Gli1P47806 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Gm43137-201ENSMUST00000198052 594 ntBASIC18.75■□□□□ 0.59
Gli1P47806 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gli1P47806 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gli1P47806 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gli1P47806 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gli1P47806 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms