Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Gm10602-201ENSMUST00000098239 609 ntBASIC18.33■□□□□ 0.52
Nkx2-6P43688 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nkx2-6P43688 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nkx2-6P43688 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-6P43688 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-6P43688 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nkx2-6P43688 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-6P43688 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-6P43688 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx2-6P43688 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nkx2-6P43688 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-6P43688 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.3■□□□□ 0.52
Nkx2-6P43688 Gm13146-201ENSMUST00000118508 780 ntBASIC18.3■□□□□ 0.52
Nkx2-6P43688 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.3■□□□□ 0.52
Nkx2-6P43688 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-6P43688 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-6P43688 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nkx2-6P43688 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nkx2-6P43688 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Gm7514-201ENSMUST00000209475 934 ntBASIC18.29■□□□□ 0.52
Nkx2-6P43688 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nkx2-6P43688 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-6P43688 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.28■□□□□ 0.52
Nkx2-6P43688 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-6P43688 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nkx2-6P43688 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nkx2-6P43688 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-6P43688 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-6P43688 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-6P43688 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-6P43688 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.27■□□□□ 0.52
Nkx2-6P43688 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.27■□□□□ 0.52
Nkx2-6P43688 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nkx2-6P43688 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-6P43688 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Nkx2-6P43688 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nkx2-6P43688 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Nkx2-6P43688 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Golph3-202ENSMUST00000226517 2359 ntBASIC18.26■□□□□ 0.51
Nkx2-6P43688 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkx2-6P43688 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkx2-6P43688 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.24■□□□□ 0.51
Nkx2-6P43688 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms