Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1dP43277 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.38■□□□□ 0.21
Hist1h1dP43277 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1dP43277 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1dP43277 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hist1h1dP43277 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.37■□□□□ 0.21
Hist1h1dP43277 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.37■□□□□ 0.21
Hist1h1dP43277 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Gm7417-201ENSMUST00000192950 473 ntBASIC16.37■□□□□ 0.21
Hist1h1dP43277 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.37■□□□□ 0.21
Hist1h1dP43277 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hist1h1dP43277 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hist1h1dP43277 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
Hist1h1dP43277 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.35■□□□□ 0.21
Hist1h1dP43277 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.35■□□□□ 0.21
Hist1h1dP43277 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hist1h1dP43277 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.35■□□□□ 0.21
Hist1h1dP43277 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Gm15820-201ENSMUST00000201566 728 ntBASIC16.34■□□□□ 0.21
Hist1h1dP43277 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hist1h1dP43277 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hist1h1dP43277 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Hist1h1dP43277 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hist1h1dP43277 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.33■□□□□ 0.2
Hist1h1dP43277 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hist1h1dP43277 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1dP43277 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hist1h1dP43277 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.31■□□□□ 0.2
Hist1h1dP43277 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms