Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.15■□□□□ 0.98
HttP42859 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HttP42859 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
HttP42859 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HttP42859 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HttP42859 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.14■□□□□ 0.97
HttP42859 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HttP42859 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HttP42859 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HttP42859 Gm2559-201ENSMUST00000201323 363 ntBASIC21.14■□□□□ 0.97
HttP42859 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HttP42859 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HttP42859 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.13■□□□□ 0.97
HttP42859 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.13■□□□□ 0.97
HttP42859 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HttP42859 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HttP42859 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HttP42859 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HttP42859 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HttP42859 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HttP42859 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.13■□□□□ 0.97
HttP42859 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HttP42859 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HttP42859 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.12■□□□□ 0.97
HttP42859 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HttP42859 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HttP42859 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HttP42859 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.12■□□□□ 0.97
HttP42859 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.12■□□□□ 0.97
HttP42859 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HttP42859 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HttP42859 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HttP42859 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HttP42859 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HttP42859 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HttP42859 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HttP42859 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HttP42859 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HttP42859 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HttP42859 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HttP42859 Gm43799-201ENSMUST00000201845 579 ntBASIC21.11■□□□□ 0.97
HttP42859 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HttP42859 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HttP42859 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HttP42859 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.1■□□□□ 0.97
HttP42859 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HttP42859 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HttP42859 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HttP42859 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.1■□□□□ 0.97
HttP42859 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HttP42859 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HttP42859 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.09■□□□□ 0.97
HttP42859 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HttP42859 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
HttP42859 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HttP42859 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HttP42859 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HttP42859 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
HttP42859 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HttP42859 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HttP42859 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HttP42859 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.08■□□□□ 0.96
HttP42859 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
HttP42859 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.08■□□□□ 0.96
HttP42859 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HttP42859 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HttP42859 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HttP42859 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HttP42859 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HttP42859 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.07■□□□□ 0.96
HttP42859 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HttP42859 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.07■□□□□ 0.96
HttP42859 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HttP42859 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HttP42859 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.07■□□□□ 0.96
HttP42859 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HttP42859 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HttP42859 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HttP42859 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.06■□□□□ 0.96
HttP42859 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.06■□□□□ 0.96
HttP42859 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HttP42859 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
HttP42859 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HttP42859 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HttP42859 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HttP42859 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HttP42859 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HttP42859 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HttP42859 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HttP42859 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HttP42859 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HttP42859 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms