Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pbx1P41778 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pbx1P41778 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pbx1P41778 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pbx1P41778 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pbx1P41778 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Pbx1P41778 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.97■□□□□ 0.95
Pbx1P41778 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.97■□□□□ 0.95
Pbx1P41778 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pbx1P41778 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pbx1P41778 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pbx1P41778 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.96■□□□□ 0.95
Pbx1P41778 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pbx1P41778 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pbx1P41778 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pbx1P41778 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pbx1P41778 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pbx1P41778 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pbx1P41778 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.96■□□□□ 0.95
Pbx1P41778 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pbx1P41778 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pbx1P41778 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.95■□□□□ 0.94
Pbx1P41778 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pbx1P41778 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pbx1P41778 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pbx1P41778 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pbx1P41778 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pbx1P41778 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Pbx1P41778 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pbx1P41778 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.94■□□□□ 0.94
Pbx1P41778 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pbx1P41778 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pbx1P41778 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pbx1P41778 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pbx1P41778 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pbx1P41778 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pbx1P41778 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pbx1P41778 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.93■□□□□ 0.94
Pbx1P41778 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.93■□□□□ 0.94
Pbx1P41778 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pbx1P41778 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pbx1P41778 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pbx1P41778 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Pbx1P41778 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pbx1P41778 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.92■□□□□ 0.94
Pbx1P41778 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pbx1P41778 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.92■□□□□ 0.94
Pbx1P41778 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.92■□□□□ 0.94
Pbx1P41778 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pbx1P41778 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pbx1P41778 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pbx1P41778 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pbx1P41778 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pbx1P41778 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
Pbx1P41778 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pbx1P41778 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pbx1P41778 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pbx1P41778 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pbx1P41778 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.9■□□□□ 0.94
Pbx1P41778 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pbx1P41778 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pbx1P41778 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pbx1P41778 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Pbx1P41778 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Pbx1P41778 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.89■□□□□ 0.94
Pbx1P41778 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pbx1P41778 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pbx1P41778 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.89■□□□□ 0.93
Pbx1P41778 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.89■□□□□ 0.93
Pbx1P41778 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pbx1P41778 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pbx1P41778 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pbx1P41778 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pbx1P41778 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pbx1P41778 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.89■□□□□ 0.93
Pbx1P41778 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Pbx1P41778 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pbx1P41778 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms