Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.11■□□□□ 0.49
Sox6P40645 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sox6P40645 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Sox6P40645 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sox6P40645 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Gm43530-201ENSMUST00000195920 274 ntBASIC18.09■□□□□ 0.49
Sox6P40645 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sox6P40645 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sox6P40645 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.09■□□□□ 0.49
Sox6P40645 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sox6P40645 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sox6P40645 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sox6P40645 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sox6P40645 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox6P40645 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox6P40645 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sox6P40645 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sox6P40645 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox6P40645 Gm13241-201ENSMUST00000094493 780 ntBASIC18.08■□□□□ 0.48
Sox6P40645 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox6P40645 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Sox6P40645 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
Sox6P40645 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Sox6P40645 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.07■□□□□ 0.48
Sox6P40645 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sox6P40645 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox6P40645 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Sox6P40645 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.06■□□□□ 0.48
Sox6P40645 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox6P40645 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sox6P40645 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox6P40645 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.05■□□□□ 0.48
Sox6P40645 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.05■□□□□ 0.48
Sox6P40645 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox6P40645 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.04■□□□□ 0.48
Sox6P40645 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.04■□□□□ 0.48
Sox6P40645 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.04■□□□□ 0.48
Sox6P40645 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sox6P40645 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sox6P40645 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox6P40645 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms