Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rab5cP35278 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rab5cP35278 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rab5cP35278 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rab5cP35278 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.82■□□□□ 0.12
Rab5cP35278 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Rab5cP35278 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rab5cP35278 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rab5cP35278 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.81■□□□□ 0.12
Rab5cP35278 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.81■□□□□ 0.12
Rab5cP35278 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.81■□□□□ 0.12
Rab5cP35278 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.81■□□□□ 0.12
Rab5cP35278 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rab5cP35278 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rab5cP35278 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rab5cP35278 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.8■□□□□ 0.12
Rab5cP35278 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.8■□□□□ 0.12
Rab5cP35278 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rab5cP35278 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rab5cP35278 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.8■□□□□ 0.12
Rab5cP35278 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rab5cP35278 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.8■□□□□ 0.12
Rab5cP35278 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rab5cP35278 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rab5cP35278 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rab5cP35278 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab5cP35278 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab5cP35278 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.79■□□□□ 0.12
Rab5cP35278 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.79■□□□□ 0.12
Rab5cP35278 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rab5cP35278 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab5cP35278 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.79■□□□□ 0.12
Rab5cP35278 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab5cP35278 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rab5cP35278 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 BC021767-201ENSMUST00000126387 1716 ntBASIC15.78■□□□□ 0.12
Rab5cP35278 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.78■□□□□ 0.12
Rab5cP35278 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rab5cP35278 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.77■□□□□ 0.12
Rab5cP35278 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab5cP35278 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rab5cP35278 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.77■□□□□ 0.12
Rab5cP35278 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rab5cP35278 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab5cP35278 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rab5cP35278 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab5cP35278 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rab5cP35278 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab5cP35278 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab5cP35278 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rab5cP35278 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rab5cP35278 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.77■□□□□ 0.11
Rab5cP35278 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rab5cP35278 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rab5cP35278 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms