Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp13P33435 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp13P33435 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp13P33435 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp13P33435 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp13P33435 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp13P33435 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Mmp13P33435 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp13P33435 Gm27454-201ENSMUST00000185090 204 ntBASIC19.77■□□□□ 0.76
Mmp13P33435 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp13P33435 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.77■□□□□ 0.76
Mmp13P33435 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.77■□□□□ 0.75
Mmp13P33435 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp13P33435 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.76■□□□□ 0.75
Mmp13P33435 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp13P33435 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.76■□□□□ 0.75
Mmp13P33435 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.76■□□□□ 0.75
Mmp13P33435 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp13P33435 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp13P33435 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp13P33435 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp13P33435 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp13P33435 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp13P33435 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp13P33435 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp13P33435 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp13P33435 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp13P33435 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp13P33435 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.75■□□□□ 0.75
Mmp13P33435 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Mmp13P33435 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Mmp13P33435 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Mmp13P33435 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Mmp13P33435 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.74■□□□□ 0.75
Mmp13P33435 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Mmp13P33435 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp13P33435 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Mmp13P33435 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp13P33435 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.73■□□□□ 0.75
Mmp13P33435 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Mmp13P33435 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Mmp13P33435 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp13P33435 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.72■□□□□ 0.75
Mmp13P33435 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.72■□□□□ 0.75
Mmp13P33435 Gm45417-201ENSMUST00000209533 758 ntBASIC19.72■□□□□ 0.75
Mmp13P33435 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp13P33435 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp13P33435 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Mmp13P33435 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp13P33435 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Mmp13P33435 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp13P33435 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp13P33435 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp13P33435 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp13P33435 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.71■□□□□ 0.75
Mmp13P33435 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp13P33435 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp13P33435 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp13P33435 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Mmp13P33435 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.71■□□□□ 0.75
Mmp13P33435 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Mmp13P33435 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.71■□□□□ 0.75
Mmp13P33435 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp13P33435 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp13P33435 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp13P33435 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mmp13P33435 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Mmp13P33435 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp13P33435 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp13P33435 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp13P33435 Gm43137-201ENSMUST00000198052 594 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms