Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a13P31649 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a13P31649 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a13P31649 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a13P31649 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a13P31649 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a13P31649 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a13P31649 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.71■□□□□ 0.75
Slc6a13P31649 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a13P31649 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Slc6a13P31649 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a13P31649 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Slc6a13P31649 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Slc6a13P31649 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slc6a13P31649 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Slc6a13P31649 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a13P31649 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slc6a13P31649 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.69■□□□□ 0.74
Slc6a13P31649 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.69■□□□□ 0.74
Slc6a13P31649 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.69■□□□□ 0.74
Slc6a13P31649 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a13P31649 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a13P31649 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a13P31649 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.68■□□□□ 0.74
Slc6a13P31649 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Slc6a13P31649 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a13P31649 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a13P31649 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.67■□□□□ 0.74
Slc6a13P31649 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a13P31649 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a13P31649 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a13P31649 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.66■□□□□ 0.74
Slc6a13P31649 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Slc6a13P31649 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a13P31649 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Slc6a13P31649 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc6a13P31649 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.66■□□□□ 0.74
Slc6a13P31649 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a13P31649 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc6a13P31649 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a13P31649 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.65■□□□□ 0.74
Slc6a13P31649 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.65■□□□□ 0.74
Slc6a13P31649 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a13P31649 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Slc6a13P31649 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.65■□□□□ 0.74
Slc6a13P31649 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Slc6a13P31649 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.65■□□□□ 0.74
Slc6a13P31649 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a13P31649 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a13P31649 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Slc6a13P31649 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a13P31649 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a13P31649 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a13P31649 Gm43060-201ENSMUST00000200621 289 ntBASIC19.64■□□□□ 0.73
Slc6a13P31649 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a13P31649 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc6a13P31649 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a13P31649 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Slc6a13P31649 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Slc6a13P31649 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Slc6a13P31649 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.63■□□□□ 0.73
Slc6a13P31649 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.63■□□□□ 0.73
Slc6a13P31649 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.63■□□□□ 0.73
Slc6a13P31649 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a13P31649 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a13P31649 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Slc6a13P31649 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms