Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl5P30882 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl5P30882 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccl5P30882 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccl5P30882 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccl5P30882 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
Ccl5P30882 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.27■□□□□ 0.83
Ccl5P30882 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccl5P30882 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.26■□□□□ 0.83
Ccl5P30882 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Ccl5P30882 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccl5P30882 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccl5P30882 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccl5P30882 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl5P30882 Gm11249-201ENSMUST00000117071 859 ntBASIC20.25■□□□□ 0.83
Ccl5P30882 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl5P30882 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl5P30882 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl5P30882 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl5P30882 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl5P30882 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl5P30882 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccl5P30882 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccl5P30882 Gm10231-201ENSMUST00000181584 441 ntBASIC20.24■□□□□ 0.83
Ccl5P30882 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Gm10175-202ENSMUST00000208752 441 ntBASIC20.24■□□□□ 0.83
Ccl5P30882 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccl5P30882 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl5P30882 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.23■□□□□ 0.83
Ccl5P30882 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Gm21362-201ENSMUST00000194272 928 ntBASIC20.23■□□□□ 0.83
Ccl5P30882 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Gm10819-201ENSMUST00000099988 561 ntBASIC20.23■□□□□ 0.83
Ccl5P30882 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl5P30882 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl5P30882 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl5P30882 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccl5P30882 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl5P30882 Gm6433-201ENSMUST00000118634 875 ntBASIC20.22■□□□□ 0.83
Ccl5P30882 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.22■□□□□ 0.83
Ccl5P30882 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.22■□□□□ 0.83
Ccl5P30882 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl5P30882 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl5P30882 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl5P30882 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl5P30882 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl5P30882 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccl5P30882 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccl5P30882 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl5P30882 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl5P30882 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccl5P30882 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl5P30882 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl5P30882 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.2■□□□□ 0.82
Ccl5P30882 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl5P30882 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl5P30882 Gm43799-201ENSMUST00000201845 579 ntBASIC20.2■□□□□ 0.82
Ccl5P30882 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl5P30882 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ccl5P30882 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl5P30882 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccl5P30882 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.19■□□□□ 0.82
Ccl5P30882 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.19■□□□□ 0.82
Ccl5P30882 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl5P30882 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl5P30882 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl5P30882 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl5P30882 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl5P30882 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl5P30882 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl5P30882 Gm7860-201ENSMUST00000121190 879 ntBASIC20.18■□□□□ 0.82
Ccl5P30882 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccl5P30882 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccl5P30882 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl5P30882 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl5P30882 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl5P30882 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl5P30882 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms