Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd8P29595 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.94■□□□□ 0.46
Nedd8P29595 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.94■□□□□ 0.46
Nedd8P29595 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd8P29595 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd8P29595 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd8P29595 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.94■□□□□ 0.46
Nedd8P29595 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nedd8P29595 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.94■□□□□ 0.46
Nedd8P29595 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nedd8P29595 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd8P29595 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd8P29595 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nedd8P29595 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nedd8P29595 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd8P29595 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.92■□□□□ 0.46
Nedd8P29595 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nedd8P29595 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.92■□□□□ 0.46
Nedd8P29595 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nedd8P29595 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nedd8P29595 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nedd8P29595 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nedd8P29595 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nedd8P29595 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.91■□□□□ 0.46
Nedd8P29595 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nedd8P29595 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nedd8P29595 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nedd8P29595 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.91■□□□□ 0.46
Nedd8P29595 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nedd8P29595 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.91■□□□□ 0.46
Nedd8P29595 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Nedd8P29595 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.9■□□□□ 0.46
Nedd8P29595 Gm16437-201ENSMUST00000025669 507 ntBASIC17.9■□□□□ 0.46
Nedd8P29595 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Gm6311-201ENSMUST00000073790 878 ntBASIC17.9■□□□□ 0.46
Nedd8P29595 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nedd8P29595 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nedd8P29595 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.89■□□□□ 0.46
Nedd8P29595 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nedd8P29595 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nedd8P29595 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nedd8P29595 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
Nedd8P29595 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.89■□□□□ 0.45
Nedd8P29595 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nedd8P29595 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.89■□□□□ 0.45
Nedd8P29595 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.89■□□□□ 0.45
Nedd8P29595 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nedd8P29595 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nedd8P29595 BC021767-201ENSMUST00000126387 1716 ntBASIC17.89■□□□□ 0.45
Nedd8P29595 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nedd8P29595 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nedd8P29595 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nedd8P29595 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nedd8P29595 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.88■□□□□ 0.45
Nedd8P29595 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nedd8P29595 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Nedd8P29595 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nedd8P29595 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nedd8P29595 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nedd8P29595 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nedd8P29595 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nedd8P29595 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nedd8P29595 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.87■□□□□ 0.45
Nedd8P29595 Scarna2-201ENSMUST00000157560 414 ntBASIC17.87■□□□□ 0.45
Nedd8P29595 Gm9806-201ENSMUST00000051080 552 ntBASIC17.87■□□□□ 0.45
Nedd8P29595 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 211 ms