Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccl6P27784 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccl6P27784 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.05■□□□□ -0
Ccl6P27784 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.05■□□□□ -0
Ccl6P27784 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccl6P27784 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccl6P27784 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Ccl6P27784 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccl6P27784 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccl6P27784 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ccl6P27784 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ccl6P27784 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.05■□□□□ -0
Ccl6P27784 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccl6P27784 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccl6P27784 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccl6P27784 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccl6P27784 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccl6P27784 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccl6P27784 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccl6P27784 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Ccl6P27784 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccl6P27784 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccl6P27784 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Ccl6P27784 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccl6P27784 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccl6P27784 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccl6P27784 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ccl6P27784 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.03■□□□□ -0
Ccl6P27784 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccl6P27784 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccl6P27784 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccl6P27784 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccl6P27784 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccl6P27784 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.02■□□□□ -0
Ccl6P27784 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccl6P27784 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccl6P27784 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.02■□□□□ -0
Ccl6P27784 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.02■□□□□ -0
Ccl6P27784 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccl6P27784 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccl6P27784 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccl6P27784 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccl6P27784 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccl6P27784 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccl6P27784 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccl6P27784 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ccl6P27784 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.01□□□□□ -0.01
Ccl6P27784 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ccl6P27784 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccl6P27784 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ccl6P27784 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ccl6P27784 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ccl6P27784 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Ccl6P27784 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl6P27784 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccl6P27784 AA386476-201ENSMUST00000098781 1665 ntBASIC15□□□□□ -0.01
Ccl6P27784 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15□□□□□ -0.01
Ccl6P27784 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccl6P27784 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15□□□□□ -0.01
Ccl6P27784 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl6P27784 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccl6P27784 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl6P27784 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Ccl6P27784 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms