Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afxP27661 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H2afxP27661 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.35■□□□□ 0.85
H2afxP27661 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afxP27661 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H2afxP27661 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afxP27661 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.35■□□□□ 0.85
H2afxP27661 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H2afxP27661 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afxP27661 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afxP27661 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
H2afxP27661 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.34■□□□□ 0.85
H2afxP27661 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afxP27661 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
H2afxP27661 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
H2afxP27661 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2afxP27661 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
H2afxP27661 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H2afxP27661 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afxP27661 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
H2afxP27661 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
H2afxP27661 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Gm16437-201ENSMUST00000025669 507 ntBASIC20.33■□□□□ 0.85
H2afxP27661 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H2afxP27661 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
H2afxP27661 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2afxP27661 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2afxP27661 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
H2afxP27661 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.32■□□□□ 0.84
H2afxP27661 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.32■□□□□ 0.84
H2afxP27661 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
H2afxP27661 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Gm9806-201ENSMUST00000051080 552 ntBASIC20.32■□□□□ 0.84
H2afxP27661 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afxP27661 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
H2afxP27661 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.31■□□□□ 0.84
H2afxP27661 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afxP27661 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afxP27661 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afxP27661 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afxP27661 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afxP27661 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
H2afxP27661 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2afxP27661 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afxP27661 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
H2afxP27661 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
H2afxP27661 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.3■□□□□ 0.84
H2afxP27661 Scarna2-201ENSMUST00000157560 414 ntBASIC20.3■□□□□ 0.84
H2afxP27661 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.3■□□□□ 0.84
H2afxP27661 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.3■□□□□ 0.84
H2afxP27661 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.3■□□□□ 0.84
H2afxP27661 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H2afxP27661 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2afxP27661 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H2afxP27661 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
H2afxP27661 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.29■□□□□ 0.84
H2afxP27661 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
H2afxP27661 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afxP27661 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afxP27661 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
H2afxP27661 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afxP27661 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
H2afxP27661 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afxP27661 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
H2afxP27661 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afxP27661 Gm6311-201ENSMUST00000073790 878 ntBASIC20.27■□□□□ 0.84
H2afxP27661 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afxP27661 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afxP27661 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
H2afxP27661 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
H2afxP27661 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
H2afxP27661 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms