Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpl3P27659 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rpl3P27659 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.35■□□□□ 0.53
Rpl3P27659 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rpl3P27659 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpl3P27659 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpl3P27659 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl3P27659 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Rpl3P27659 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl3P27659 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl3P27659 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl3P27659 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl3P27659 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl3P27659 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpl3P27659 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl3P27659 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpl3P27659 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.33■□□□□ 0.53
Rpl3P27659 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl3P27659 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl3P27659 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl3P27659 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.33■□□□□ 0.52
Rpl3P27659 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl3P27659 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl3P27659 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rpl3P27659 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpl3P27659 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpl3P27659 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.32■□□□□ 0.52
Rpl3P27659 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rpl3P27659 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl3P27659 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rpl3P27659 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl3P27659 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl3P27659 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl3P27659 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rpl3P27659 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Rpl3P27659 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.31■□□□□ 0.52
Rpl3P27659 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl3P27659 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl3P27659 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpl3P27659 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rpl3P27659 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.3■□□□□ 0.52
Rpl3P27659 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.3■□□□□ 0.52
Rpl3P27659 Serp2-204ENSMUST00000228055 705 ntBASIC18.3■□□□□ 0.52
Rpl3P27659 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl3P27659 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl3P27659 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.29■□□□□ 0.52
Rpl3P27659 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.29■□□□□ 0.52
Rpl3P27659 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.29■□□□□ 0.52
Rpl3P27659 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.29■□□□□ 0.52
Rpl3P27659 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rpl3P27659 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl3P27659 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.29■□□□□ 0.52
Rpl3P27659 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl3P27659 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl3P27659 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Rpl3P27659 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl3P27659 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.28■□□□□ 0.52
Rpl3P27659 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rpl3P27659 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.28■□□□□ 0.52
Rpl3P27659 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rpl3P27659 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.28■□□□□ 0.52
Rpl3P27659 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms